BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035H07LP1|AL430132
(976 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1221 768 0.0
3x_Contig1333 367 e-101
>3x_Contig1221
Length = 4893
Score = 768 bits (387), Expect = 0.0
Identities = 391/393 (99%)
Strand = Plus / Plus
Query: 584 aattcctcatcgaccttagggattgtgcttgtatctagatgagggaatgcctgagctgct 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 aattcctcatcgaccttagggattgtgcttgtatctagatgagggaatgcctgagctgct 64
Query: 644 gaaaccattacttccatcgccttcatataagagcccacggaatggactgaataagtcgta 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gaaaccattacttccatcgccttcatataagagcccacggaatggactgaataagtcgta 124
Query: 704 ctcatcctgtacaaagattaatattatcaaccctatagccaaactacagtataacgactg 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ctcatcctgtacaaagattaatattatcaaccctatagccaaactacagtataacgactg 184
Query: 764 ttacggttttccaatatgggctttacgttgatcttcttgtgttaaagtcaacttaaaagg 823
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 taacggttttccaatatgggctttacgttgatcttcttgtgttaaagtcaacttaaaagg 244
Query: 824 tgttctttgctaaagattacgaattatgattcttgtgcacttttaacaatgcgaagagat 883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tgttctttgctaaagattacgaattatgattcttgtgcacttttaacaatgcgaagagat 304
Query: 884 gagctataaaaaaaaaggctactgactactagtattaactatccatagaaacgctattgg 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gagctataaaaaaaaaggctactgactactagtattaactatccatagaaacgctattgg 364
Query: 944 scactcaatttacctattctcacctctagatcg 976
||||||||||||||||||||||||||||||||
Sbjct: 365 ccactcaatttacctattctcacctctagatcg 397
>3x_Contig1333
Length = 6390
Score = 367 bits (185), Expect = e-101
Identities = 192/193 (99%), Gaps = 1/193 (0%)
Strand = Plus / Minus
Query: 1 agctggtaatgcaaatttttgacctgcaaaagaaagcattgacgatccagcatcctccga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 agctggtaatgcaaatttttgacctgcaaaagaaagcattgacgatccagcatcctccga 136
Query: 61 ctgtctaaagacatgtggatactttacttttctttgtgcagtagccaatttagcgttttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 ctgtctaaagacatgtggatactttacttttctttgtgcagtagccaatttagcgttttt 76
Query: 121 acctttttccctattcttgaggacttgtcttctcatgtcctcttcggtcatgaa-tcggt 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 75 acctttttccctattcttgaggacttgtcttctcatgtcctcttcggtcatgaattcggt 16
Query: 180 ttccctcgtaagt 192
|||||||||||||
Sbjct: 15 ttccctcgtaagt 3
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7777
Number of Sequences: 1807
Number of extensions: 7777
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 2
length of query: 976
length of database: 10,358,551
effective HSP length: 16
effective length of query: 960
effective length of database: 10,329,639
effective search space: 9916453440
effective search space used: 9916453440
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)